Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.74□□□□□ -0.37
CX3CR1P49238 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CX3CR1P49238 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.74□□□□□ -0.37
CX3CR1P49238 AL358472.3-201ENST00000608147 415 ntBASIC12.74□□□□□ -0.37
CX3CR1P49238 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.74□□□□□ -0.37
CX3CR1P49238 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.74□□□□□ -0.37
CX3CR1P49238 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.74□□□□□ -0.37
CX3CR1P49238 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CX3CR1P49238 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CX3CR1P49238 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.74□□□□□ -0.37
CX3CR1P49238 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CX3CR1P49238 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.74□□□□□ -0.37
CX3CR1P49238 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CX3CR1P49238 AC099521.3-201ENST00000624251 2938 ntBASIC12.74□□□□□ -0.37
CX3CR1P49238 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CX3CR1P49238 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CR1P49238 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CX3CR1P49238 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 AC112492.5-201ENST00000421897 457 ntBASIC12.73□□□□□ -0.37
CX3CR1P49238 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 AL161932.2-201ENST00000435436 679 ntBASIC12.73□□□□□ -0.37
CX3CR1P49238 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.73□□□□□ -0.37
CX3CR1P49238 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
CX3CR1P49238 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.73□□□□□ -0.37
CX3CR1P49238 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.73□□□□□ -0.37
CX3CR1P49238 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.73□□□□□ -0.37
CX3CR1P49238 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 AC008825.2-201ENST00000603374 718 ntBASIC12.73□□□□□ -0.37
CX3CR1P49238 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 ZACNP1-201ENST00000612259 710 ntBASIC12.73□□□□□ -0.37
CX3CR1P49238 AL136301.1-201ENST00000615830 422 ntBASIC12.73□□□□□ -0.37
CX3CR1P49238 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CX3CR1P49238 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.73□□□□□ -0.37
CX3CR1P49238 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.73□□□□□ -0.37
CX3CR1P49238 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CX3CR1P49238 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms