Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.87■□□□□ 0.29
NEDD4P46934 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.87■□□□□ 0.29
NEDD4P46934 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.87■□□□□ 0.29
NEDD4P46934 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.87■□□□□ 0.29
NEDD4P46934 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 AC091812.3-201ENST00000621362 345 ntBASIC16.87■□□□□ 0.29
NEDD4P46934 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 AC063926.3-201ENST00000624734 5658 ntBASIC16.86■□□□□ 0.29
NEDD4P46934 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.86■□□□□ 0.29
NEDD4P46934 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.86■□□□□ 0.29
NEDD4P46934 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.86■□□□□ 0.29
NEDD4P46934 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NEDD4P46934 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 OR2K2-202ENST00000374428 1038 ntBASIC16.86■□□□□ 0.29
NEDD4P46934 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.86■□□□□ 0.29
NEDD4P46934 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.86■□□□□ 0.29
NEDD4P46934 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.86■□□□□ 0.29
NEDD4P46934 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.86■□□□□ 0.29
NEDD4P46934 AC242376.1-201ENST00000559033 726 ntBASIC16.86■□□□□ 0.29
NEDD4P46934 BAP1-211ENST00000615113 489 ntBASIC16.86■□□□□ 0.29
NEDD4P46934 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.86■□□□□ 0.29
NEDD4P46934 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.86■□□□□ 0.29
NEDD4P46934 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NEDD4P46934 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.86■□□□□ 0.29
NEDD4P46934 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.86■□□□□ 0.29
NEDD4P46934 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.86■□□□□ 0.29
NEDD4P46934 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.86■□□□□ 0.29
NEDD4P46934 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.86■□□□□ 0.29
NEDD4P46934 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEDD4P46934 AC067931.2-201ENST00000623655 2003 ntBASIC16.86■□□□□ 0.29
NEDD4P46934 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.86■□□□□ 0.29
NEDD4P46934 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
NEDD4P46934 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NEDD4P46934 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.85■□□□□ 0.29
NEDD4P46934 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NEDD4P46934 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NEDD4P46934 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NEDD4P46934 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.85■□□□□ 0.29
NEDD4P46934 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.85■□□□□ 0.29
NEDD4P46934 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.85■□□□□ 0.29
NEDD4P46934 SLC25A24P2-201ENST00000415059 510 ntBASIC16.85■□□□□ 0.29
NEDD4P46934 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.85■□□□□ 0.29
NEDD4P46934 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.85■□□□□ 0.29
NEDD4P46934 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 FGFR3P5-201ENST00000564496 886 ntBASIC16.85■□□□□ 0.29
NEDD4P46934 PHBP15-201ENST00000574228 665 ntBASIC16.85■□□□□ 0.29
NEDD4P46934 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.85■□□□□ 0.29
NEDD4P46934 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.85■□□□□ 0.29
NEDD4P46934 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms