Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HTR3AP46098 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 MIR1202-201ENST00000408529 83 ntBASIC13.41□□□□□ -0.26
HTR3AP46098 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.41□□□□□ -0.26
HTR3AP46098 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.41□□□□□ -0.26
HTR3AP46098 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HTR3AP46098 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.41□□□□□ -0.26
HTR3AP46098 LINC01922-201ENST00000562582 719 ntBASIC13.41□□□□□ -0.26
HTR3AP46098 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.41□□□□□ -0.26
HTR3AP46098 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.41□□□□□ -0.26
HTR3AP46098 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HTR3AP46098 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.41□□□□□ -0.26
HTR3AP46098 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HTR3AP46098 AC092053.3-201ENST00000641308 4975 ntBASIC13.41□□□□□ -0.26
HTR3AP46098 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HTR3AP46098 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.41□□□□□ -0.26
HTR3AP46098 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.41□□□□□ -0.26
HTR3AP46098 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HTR3AP46098 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.41□□□□□ -0.26
HTR3AP46098 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HTR3AP46098 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.4□□□□□ -0.26
HTR3AP46098 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
HTR3AP46098 AC131902.2-201ENST00000566892 2172 ntBASIC13.4□□□□□ -0.26
HTR3AP46098 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
HTR3AP46098 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
HTR3AP46098 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.4□□□□□ -0.26
HTR3AP46098 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.4□□□□□ -0.26
HTR3AP46098 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.4□□□□□ -0.26
HTR3AP46098 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.4□□□□□ -0.26
HTR3AP46098 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.4□□□□□ -0.26
HTR3AP46098 HOMER2P2-201ENST00000451621 847 ntBASIC13.4□□□□□ -0.26
HTR3AP46098 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.4□□□□□ -0.26
HTR3AP46098 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
HTR3AP46098 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.4□□□□□ -0.26
HTR3AP46098 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.4□□□□□ -0.26
HTR3AP46098 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.4□□□□□ -0.26
HTR3AP46098 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.4□□□□□ -0.26
HTR3AP46098 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.4□□□□□ -0.26
HTR3AP46098 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.4□□□□□ -0.26
HTR3AP46098 AC073413.1-201ENST00000603927 732 ntBASIC13.4□□□□□ -0.26
HTR3AP46098 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.4□□□□□ -0.26
HTR3AP46098 AL035252.4-201ENST00000624174 288 ntBASIC13.4□□□□□ -0.26
HTR3AP46098 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HTR3AP46098 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 AL590440.2-201ENST00000641973 1595 ntBASIC13.4□□□□□ -0.26
HTR3AP46098 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.4□□□□□ -0.26
HTR3AP46098 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 KHSRPP1-201ENST00000427983 1768 ntBASIC13.4□□□□□ -0.26
HTR3AP46098 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HTR3AP46098 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HTR3AP46098 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
HTR3AP46098 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
HTR3AP46098 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.39□□□□□ -0.27
HTR3AP46098 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
HTR3AP46098 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HTR3AP46098 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.39□□□□□ -0.27
HTR3AP46098 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HTR3AP46098 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.39□□□□□ -0.27
HTR3AP46098 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.39□□□□□ -0.27
HTR3AP46098 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HTR3AP46098 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.39□□□□□ -0.27
HTR3AP46098 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HTR3AP46098 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HTR3AP46098 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HTR3AP46098 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HTR3AP46098 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms