Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NR4A2P43354 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NR4A2P43354 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.23□□□□□ -0.29
NR4A2P43354 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
NR4A2P43354 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A2P43354 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.23□□□□□ -0.29
NR4A2P43354 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 AL031595.1-201ENST00000623969 4709 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 AC104457.1-201ENST00000401024 814 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 TOMM22P5-201ENST00000416399 439 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.22□□□□□ -0.29
NR4A2P43354 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.22□□□□□ -0.29
NR4A2P43354 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 CROCCP4-201ENST00000457096 498 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 RPL13AP25-201ENST00000484130 612 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 USP32P1-208ENST00000506594 1164 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.22□□□□□ -0.29
NR4A2P43354 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.22□□□□□ -0.29
NR4A2P43354 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
NR4A2P43354 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 MIR4259-201ENST00000584466 101 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 BRI3BPP1-201ENST00000594224 787 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 MIR193BHG-211ENST00000641433 5365 ntBASIC13.22□□□□□ -0.29
NR4A2P43354 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A2P43354 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
NR4A2P43354 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A2P43354 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NR4A2P43354 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NR4A2P43354 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NR4A2P43354 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
NR4A2P43354 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NR4A2P43354 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NR4A2P43354 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.21□□□□□ -0.29
NR4A2P43354 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NR4A2P43354 AC018665.1-201ENST00000622927 1362 ntBASIC13.21□□□□□ -0.29
NR4A2P43354 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms