Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.7□□□□□ -0.38
RAB3BP20337 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.7□□□□□ -0.38
RAB3BP20337 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
RAB3BP20337 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.7□□□□□ -0.38
RAB3BP20337 AL589987.1-201ENST00000453380 819 ntBASIC12.7□□□□□ -0.38
RAB3BP20337 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.7□□□□□ -0.38
RAB3BP20337 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.7□□□□□ -0.38
RAB3BP20337 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 AP001582.1-201ENST00000525856 295 ntBASIC12.7□□□□□ -0.38
RAB3BP20337 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.7□□□□□ -0.38
RAB3BP20337 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RAB3BP20337 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.7□□□□□ -0.38
RAB3BP20337 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RAB3BP20337 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.7□□□□□ -0.38
RAB3BP20337 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 AC125807.2-201ENST00000513358 3514 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB3BP20337 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RAB3BP20337 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 RN7SKP230-201ENST00000365642 335 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 KRT18P13-201ENST00000400056 1290 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.69□□□□□ -0.38
RAB3BP20337 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB3BP20337 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 FO681548.1-201ENST00000455617 1132 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 RN7SL399P-201ENST00000471648 279 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 AC125807.1-201ENST00000483097 614 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.69□□□□□ -0.38
RAB3BP20337 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB3BP20337 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB3BP20337 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB3BP20337 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB3BP20337 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB3BP20337 AC004840.1-201ENST00000636359 365 ntBASIC12.69□□□□□ -0.38
RAB3BP20337 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RAB3BP20337 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB3BP20337 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB3BP20337 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms