Protein–RNA interactions for Protein: P17482

HOXB9, Homeobox protein Hox-B9, humanhuman

Predicted RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB9P17482 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 AL355994.2-201ENST00000447882 704 ntBASIC13.53□□□□□ -0.24
HOXB9P17482 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 TERF1P3-201ENST00000505638 1227 ntBASIC13.53□□□□□ -0.24
HOXB9P17482 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.53□□□□□ -0.24
HOXB9P17482 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXB9P17482 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.53□□□□□ -0.24
HOXB9P17482 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXB9P17482 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXB9P17482 AC233724.13-201ENST00000598383 410 ntBASIC13.53□□□□□ -0.24
HOXB9P17482 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXB9P17482 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.53□□□□□ -0.24
HOXB9P17482 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HOXB9P17482 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXB9P17482 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.53□□□□□ -0.24
HOXB9P17482 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HOXB9P17482 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HOXB9P17482 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 AL354989.2-201ENST00000435838 1540 ntBASIC13.53□□□□□ -0.24
HOXB9P17482 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 SALL4P6-201ENST00000429385 1691 ntBASIC13.53□□□□□ -0.24
HOXB9P17482 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXB9P17482 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXB9P17482 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HOXB9P17482 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.52□□□□□ -0.24
HOXB9P17482 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXB9P17482 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.52□□□□□ -0.24
HOXB9P17482 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXB9P17482 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HOXB9P17482 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.52□□□□□ -0.24
HOXB9P17482 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HOXB9P17482 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXB9P17482 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HOXB9P17482 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
HOXB9P17482 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HOXB9P17482 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXB9P17482 HIST2H2BB-201ENST00000449108 381 ntBASIC13.52□□□□□ -0.25
HOXB9P17482 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.52□□□□□ -0.25
HOXB9P17482 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXB9P17482 PPY2P-201ENST00000582808 702 ntBASIC13.52□□□□□ -0.25
HOXB9P17482 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.52□□□□□ -0.25
HOXB9P17482 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 AC009955.4-201ENST00000597192 544 ntBASIC13.52□□□□□ -0.25
HOXB9P17482 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HOXB9P17482 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HOXB9P17482 AC007952.5-201ENST00000572818 1486 ntBASIC13.52□□□□□ -0.25
HOXB9P17482 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXB9P17482 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXB9P17482 CCT8L1P-201ENST00000465400 1674 ntBASIC13.52□□□□□ -0.25
HOXB9P17482 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HOXB9P17482 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 AP002761.4-201ENST00000565433 3361 ntBASIC13.52□□□□□ -0.25
HOXB9P17482 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HOXB9P17482 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
HOXB9P17482 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXB9P17482 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.52□□□□□ -0.25
HOXB9P17482 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXB9P17482 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXB9P17482 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXB9P17482 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.51□□□□□ -0.25
HOXB9P17482 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXB9P17482 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
HOXB9P17482 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXB9P17482 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXB9P17482 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXB9P17482 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXB9P17482 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms