Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 AC006001.1-201ENST00000325130 474 ntBASIC14.15□□□□□ -0.14
PCNAP12004 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PCNAP12004 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 ARSEP1-201ENST00000420443 635 ntBASIC14.15□□□□□ -0.14
PCNAP12004 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.15□□□□□ -0.14
PCNAP12004 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.15□□□□□ -0.14
PCNAP12004 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.15□□□□□ -0.14
PCNAP12004 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.15□□□□□ -0.14
PCNAP12004 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.15□□□□□ -0.14
PCNAP12004 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.15□□□□□ -0.14
PCNAP12004 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.15□□□□□ -0.14
PCNAP12004 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.15□□□□□ -0.14
PCNAP12004 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PCNAP12004 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCNAP12004 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
PCNAP12004 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
PCNAP12004 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.14□□□□□ -0.15
PCNAP12004 AC016397.2-201ENST00000624848 1985 ntBASIC14.14□□□□□ -0.15
PCNAP12004 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 DGCR9-201ENST00000609630 2415 ntBASIC14.14□□□□□ -0.15
PCNAP12004 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 AC112492.5-201ENST00000421897 457 ntBASIC14.14□□□□□ -0.15
PCNAP12004 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.14□□□□□ -0.15
PCNAP12004 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 KLF2P4-201ENST00000451959 1225 ntBASIC14.14□□□□□ -0.15
PCNAP12004 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.14□□□□□ -0.15
PCNAP12004 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.14□□□□□ -0.15
PCNAP12004 KRT17P8-201ENST00000540749 863 ntBASIC14.14□□□□□ -0.15
PCNAP12004 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.14□□□□□ -0.15
PCNAP12004 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 PPY2P-201ENST00000582808 702 ntBASIC14.14□□□□□ -0.15
PCNAP12004 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 MIR6074-201ENST00000612054 107 ntBASIC14.14□□□□□ -0.15
PCNAP12004 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 CR383656.2-201ENST00000548656 2254 ntBASIC14.14□□□□□ -0.15
PCNAP12004 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PCNAP12004 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCNAP12004 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.14□□□□□ -0.15
PCNAP12004 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.14□□□□□ -0.15
PCNAP12004 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms