Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 AC008972.2-201ENST00000606587 494 ntBASIC16.08■□□□□ 0.16
HOXC6P09630 AP003392.6-201ENST00000607709 325 ntBASIC16.08■□□□□ 0.16
HOXC6P09630 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC6P09630 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HOXC6P09630 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 LINC00115-201ENST00000473798 1317 ntBASIC16.08■□□□□ 0.16
HOXC6P09630 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
HOXC6P09630 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC6P09630 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC6P09630 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HOXC6P09630 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HOXC6P09630 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
HOXC6P09630 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 AL354702.1-201ENST00000442006 1960 ntBASIC16.07■□□□□ 0.16
HOXC6P09630 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.07■□□□□ 0.16
HOXC6P09630 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.07■□□□□ 0.16
HOXC6P09630 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.07■□□□□ 0.16
HOXC6P09630 AC063952.3-201ENST00000467756 308 ntBASIC16.07■□□□□ 0.16
HOXC6P09630 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
HOXC6P09630 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 RN7SL455P-201ENST00000580629 282 ntBASIC16.07■□□□□ 0.16
HOXC6P09630 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 AC018695.6-201ENST00000614011 534 ntBASIC16.07■□□□□ 0.16
HOXC6P09630 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.07■□□□□ 0.16
HOXC6P09630 PDXDC2P-206ENST00000534700 1315 ntBASIC16.07■□□□□ 0.16
HOXC6P09630 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.07■□□□□ 0.16
HOXC6P09630 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
HOXC6P09630 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC6P09630 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HOXC6P09630 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC6P09630 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
HOXC6P09630 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC6P09630 AC007952.5-201ENST00000572818 1486 ntBASIC16.06■□□□□ 0.16
HOXC6P09630 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
HOXC6P09630 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HOXC6P09630 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC6P09630 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.06■□□□□ 0.16
HOXC6P09630 OR7E115P-201ENST00000382617 1024 ntBASIC16.06■□□□□ 0.16
HOXC6P09630 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HOXC6P09630 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.06■□□□□ 0.16
HOXC6P09630 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXC6P09630 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXC6P09630 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC6P09630 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms