Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TPM2P07951 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TPM2P07951 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TPM2P07951 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TPM2P07951 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TPM2P07951 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TPM2P07951 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC16.52■□□□□ 0.23
TPM2P07951 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
TPM2P07951 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TPM2P07951 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC16.52■□□□□ 0.23
TPM2P07951 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.52■□□□□ 0.23
TPM2P07951 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TPM2P07951 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TPM2P07951 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC16.52■□□□□ 0.23
TPM2P07951 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
TPM2P07951 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.51■□□□□ 0.23
TPM2P07951 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TPM2P07951 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.51■□□□□ 0.23
TPM2P07951 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TPM2P07951 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TPM2P07951 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC16.51■□□□□ 0.23
TPM2P07951 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TPM2P07951 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 SPDYE18-201ENST00000510091 1050 ntBASIC16.51■□□□□ 0.23
TPM2P07951 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.51■□□□□ 0.23
TPM2P07951 AC104596.2-201ENST00000512793 793 ntBASIC16.51■□□□□ 0.23
TPM2P07951 DOC2GP-202ENST00000514950 1163 ntBASIC16.51■□□□□ 0.23
TPM2P07951 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.51■□□□□ 0.23
TPM2P07951 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.51■□□□□ 0.23
TPM2P07951 AC008738.7-201ENST00000609744 511 ntBASIC16.51■□□□□ 0.23
TPM2P07951 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC16.51■□□□□ 0.23
TPM2P07951 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC16.51■□□□□ 0.23
TPM2P07951 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TPM2P07951 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TPM2P07951 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 AGGF1P1-201ENST00000509500 2073 ntBASIC16.5■□□□□ 0.23
TPM2P07951 PCDHA5-203ENST00000614258 4248 ntBASIC16.5■□□□□ 0.23
TPM2P07951 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 Z98257.2-202ENST00000641138 1548 ntBASIC16.5■□□□□ 0.23
TPM2P07951 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 AC020910.6-201ENST00000623084 1459 ntBASIC16.5■□□□□ 0.23
TPM2P07951 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM2P07951 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TPM2P07951 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TPM2P07951 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.5■□□□□ 0.23
TPM2P07951 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.5■□□□□ 0.23
TPM2P07951 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM2P07951 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TPM2P07951 DUX4L27-201ENST00000554796 1261 ntBASIC16.5■□□□□ 0.23
TPM2P07951 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.5■□□□□ 0.23
TPM2P07951 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM2P07951 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TPM2P07951 AC104794.3-201ENST00000566840 1248 ntBASIC16.5■□□□□ 0.23
TPM2P07951 RRP7BP-205ENST00000566851 833 ntBASIC16.5■□□□□ 0.23
TPM2P07951 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM2P07951 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM2P07951 AL390955.2-201ENST00000603032 514 ntBASIC16.5■□□□□ 0.23
TPM2P07951 AC007431.3-201ENST00000623221 587 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms