Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
VTNP04004 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VTNP04004 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 AC006372.4-201ENST00000624122 1543 ntBASIC15.69■□□□□ 0.1
VTNP04004 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
VTNP04004 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
VTNP04004 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.69■□□□□ 0.1
VTNP04004 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 HIST2H2BA-201ENST00000412169 381 ntBASIC15.69■□□□□ 0.1
VTNP04004 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.69■□□□□ 0.1
VTNP04004 AL512306.1-201ENST00000432698 848 ntBASIC15.69■□□□□ 0.1
VTNP04004 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VTNP04004 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.69■□□□□ 0.1
VTNP04004 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 AC095040.1-201ENST00000513286 675 ntBASIC15.69■□□□□ 0.1
VTNP04004 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.69■□□□□ 0.1
VTNP04004 AL133467.4-201ENST00000602953 725 ntBASIC15.69■□□□□ 0.1
VTNP04004 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.69■□□□□ 0.1
VTNP04004 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
VTNP04004 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VTNP04004 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.69■□□□□ 0.1
VTNP04004 HSPA8P5-201ENST00000456928 2069 ntBASIC15.69■□□□□ 0.1
VTNP04004 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 LINC00552-201ENST00000625151 2579 ntBASIC15.69■□□□□ 0.1
VTNP04004 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VTNP04004 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.68■□□□□ 0.1
VTNP04004 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 AC139749.1-202ENST00000617529 3139 ntBASIC15.68■□□□□ 0.1
VTNP04004 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.68■□□□□ 0.1
VTNP04004 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VTNP04004 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VTNP04004 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VTNP04004 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.68■□□□□ 0.1
VTNP04004 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.68■□□□□ 0.1
VTNP04004 AC005740.1-201ENST00000515639 522 ntBASIC15.68■□□□□ 0.1
VTNP04004 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.68■□□□□ 0.1
VTNP04004 HERC2P11-201ENST00000562845 725 ntBASIC15.68■□□□□ 0.1
VTNP04004 AC100756.2-201ENST00000569537 736 ntBASIC15.68■□□□□ 0.1
VTNP04004 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VTNP04004 RN7SL665P-201ENST00000578793 300 ntBASIC15.68■□□□□ 0.1
VTNP04004 MIR4750-201ENST00000584564 56 ntBASIC15.68■□□□□ 0.1
VTNP04004 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 AC073911.3-201ENST00000624401 631 ntBASIC15.68■□□□□ 0.1
VTNP04004 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.68■□□□□ 0.1
VTNP04004 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VTNP04004 TEKT4P2-202ENST00000559466 1312 ntBASIC15.68■□□□□ 0.1
VTNP04004 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.68■□□□□ 0.1
VTNP04004 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.68■□□□□ 0.1
VTNP04004 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms