Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.86□□□□□ -0.35
APOC1P02654 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.86□□□□□ -0.35
APOC1P02654 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.86□□□□□ -0.35
APOC1P02654 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.86□□□□□ -0.35
APOC1P02654 AP001889.1-201ENST00000525414 633 ntBASIC12.86□□□□□ -0.35
APOC1P02654 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.86□□□□□ -0.35
APOC1P02654 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.86□□□□□ -0.35
APOC1P02654 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOC1P02654 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.86□□□□□ -0.35
APOC1P02654 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOC1P02654 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
APOC1P02654 ARSEP1-201ENST00000420443 635 ntBASIC12.85□□□□□ -0.35
APOC1P02654 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 FAM8A4P-201ENST00000435433 1213 ntBASIC12.85□□□□□ -0.35
APOC1P02654 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.85□□□□□ -0.35
APOC1P02654 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.85□□□□□ -0.35
APOC1P02654 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.85□□□□□ -0.35
APOC1P02654 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.85□□□□□ -0.35
APOC1P02654 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.85□□□□□ -0.35
APOC1P02654 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.85□□□□□ -0.35
APOC1P02654 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms