Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AP001258.2-201ENST00000529891 490 ntBASIC13.59□□□□□ -0.23
HCN1O60741 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.59□□□□□ -0.23
HCN1O60741 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.59□□□□□ -0.23
HCN1O60741 AC104982.3-201ENST00000581995 514 ntBASIC13.59□□□□□ -0.23
HCN1O60741 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 AC073413.1-201ENST00000603927 732 ntBASIC13.59□□□□□ -0.23
HCN1O60741 AC244093.1-201ENST00000610837 814 ntBASIC13.59□□□□□ -0.23
HCN1O60741 AC005695.3-201ENST00000614522 232 ntBASIC13.59□□□□□ -0.23
HCN1O60741 GPR182-203ENST00000622922 591 ntBASIC13.59□□□□□ -0.23
HCN1O60741 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HCN1O60741 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.58□□□□□ -0.23
HCN1O60741 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HCN1O60741 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
HCN1O60741 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HCN1O60741 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 AP000593.2-201ENST00000542775 1433 ntBASIC13.58□□□□□ -0.24
HCN1O60741 PPT1-213ENST00000641319 2388 ntBASIC13.58□□□□□ -0.24
HCN1O60741 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 MIR663B-201ENST00000408361 115 ntBASIC13.58□□□□□ -0.24
HCN1O60741 GPAA1P2-201ENST00000417923 928 ntBASIC13.58□□□□□ -0.24
HCN1O60741 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.58□□□□□ -0.24
HCN1O60741 HSPB1P2-201ENST00000448722 546 ntBASIC13.58□□□□□ -0.24
HCN1O60741 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.58□□□□□ -0.24
HCN1O60741 AC004898.1-201ENST00000451057 766 ntBASIC13.58□□□□□ -0.24
HCN1O60741 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
HCN1O60741 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 AL008638.5-201ENST00000623814 1298 ntBASIC13.58□□□□□ -0.24
HCN1O60741 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HCN1O60741 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HCN1O60741 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HCN1O60741 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
HCN1O60741 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.58□□□□□ -0.24
HCN1O60741 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 FKBP4P6-201ENST00000457486 1332 ntBASIC13.58□□□□□ -0.24
HCN1O60741 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HCN1O60741 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
HCN1O60741 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCN1O60741 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCN1O60741 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCN1O60741 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.57□□□□□ -0.24
HCN1O60741 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCN1O60741 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCN1O60741 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.57□□□□□ -0.24
HCN1O60741 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCN1O60741 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.57□□□□□ -0.24
HCN1O60741 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCN1O60741 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HCN1O60741 COL6A4P2-202ENST00000504443 2753 ntBASIC13.57□□□□□ -0.24
HCN1O60741 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HCN1O60741 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HCN1O60741 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms