Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC087386.2-201ENST00000623212 4637 ntBASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 AC239868.1-201ENST00000369385 493 ntBASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 PDIA3P2-201ENST00000428073 158 ntBASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 AC234782.1-201ENST00000451950 919 ntBASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 POU5F1P2-201ENST00000521750 823 ntBASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA3F8WFD2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 CYP4F23P-201ENST00000593402 1579 ntBASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms