Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 DOC2GP-202ENST00000514950 1163 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC023310.3-201ENST00000557027 670 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC100756.1-201ENST00000562736 682 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC138749.3-201ENST00000567691 622 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC116165.1-201ENST00000611806 668 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC007431.3-201ENST00000623221 587 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AL603764.1-201ENST00000636452 321 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.75■□□□□ 0.11
CCDC66A2RUB6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC66A2RUB6 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 INTS4P2-202ENST00000614726 2019 ntBASIC15.74■□□□□ 0.11
CCDC66A2RUB6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms