Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC104640.1-201ENST00000562617 2109 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 GALP-202ENST00000440823 889 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 AC092903.1-201ENST00000466506 262 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 AC113385.2-201ENST00000614465 762 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 AIG1-203ENST00000367596 559 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 RPSAP12-201ENST00000435879 888 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 MARK2P17-201ENST00000498560 841 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 TYMSP2-201ENST00000589501 424 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 CRIP1P2-201ENST00000425396 228 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 ST13P19-201ENST00000442505 1124 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 BATF-202ENST00000555504 361 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 LINC02486-201ENST00000604157 3000 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 KRT8P18-201ENST00000413425 1445 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 GH1-203ENST00000351388 685 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 AC239600.1-201ENST00000603201 462 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 AC126755.5-201ENST00000622756 267 ntBASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD1Q96PZ7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 AC048382.6-201ENST00000621980 1223 ntBASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 AC111170.3-201ENST00000624282 2464 ntBASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CSMD1Q96PZ7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms