Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 PEG13-201ENST00000631594 5667 ntBASIC13.72□□□□□ -0.21
COL21A1Q96P44 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 HOMER2P2-201ENST00000451621 847 ntBASIC13.72□□□□□ -0.21
COL21A1Q96P44 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 AP003171.2-201ENST00000528208 925 ntBASIC13.72□□□□□ -0.21
COL21A1Q96P44 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 AL359881.2-201ENST00000602973 570 ntBASIC13.72□□□□□ -0.21
COL21A1Q96P44 AC073413.1-201ENST00000603927 732 ntBASIC13.72□□□□□ -0.21
COL21A1Q96P44 ZACNP1-201ENST00000612259 710 ntBASIC13.72□□□□□ -0.21
COL21A1Q96P44 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 TCAM1P-207ENST00000485295 1537 ntBASIC13.72□□□□□ -0.21
COL21A1Q96P44 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 AL356585.2-201ENST00000625078 2396 ntBASIC13.72□□□□□ -0.21
COL21A1Q96P44 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.72□□□□□ -0.21
COL21A1Q96P44 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL21A1Q96P44 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 AL136309.1-201ENST00000403917 691 ntBASIC13.71□□□□□ -0.21
COL21A1Q96P44 FAM21FP-201ENST00000426241 1131 ntBASIC13.71□□□□□ -0.21
COL21A1Q96P44 CNN2P10-201ENST00000443067 918 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms