Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PGBD4Q96DM1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PGBD4Q96DM1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PGBD4Q96DM1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PGBD4Q96DM1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PGBD4Q96DM1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.63■□□□□ 0.09
PGBD4Q96DM1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PGBD4Q96DM1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 AL627422.1-201ENST00000434104 580 ntBASIC15.62■□□□□ 0.09
PGBD4Q96DM1 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 FTH1P22-201ENST00000456305 520 ntBASIC15.62■□□□□ 0.09
PGBD4Q96DM1 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 AC138894.2-201ENST00000602838 371 ntBASIC15.62■□□□□ 0.09
PGBD4Q96DM1 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 AC011491.1-203ENST00000637688 543 ntBASIC15.62■□□□□ 0.09
PGBD4Q96DM1 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.62■□□□□ 0.09
PGBD4Q96DM1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 FAM45BP-202ENST00000592932 1624 ntBASIC15.61■□□□□ 0.09
PGBD4Q96DM1 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 AGGF1P1-201ENST00000509500 2073 ntBASIC15.61■□□□□ 0.09
PGBD4Q96DM1 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 AL161932.2-201ENST00000435436 679 ntBASIC15.61■□□□□ 0.09
PGBD4Q96DM1 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 RN7SL81P-201ENST00000493781 261 ntBASIC15.61■□□□□ 0.09
PGBD4Q96DM1 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 AC087045.2-201ENST00000606279 1003 ntBASIC15.61■□□□□ 0.09
PGBD4Q96DM1 U62317.3-201ENST00000608319 855 ntBASIC15.61■□□□□ 0.09
PGBD4Q96DM1 AC242376.2-201ENST00000619355 883 ntBASIC15.61■□□□□ 0.09
PGBD4Q96DM1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 AL390755.1-201ENST00000623716 2027 ntBASIC15.61■□□□□ 0.09
PGBD4Q96DM1 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.61■□□□□ 0.09
PGBD4Q96DM1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms