Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 AC005229.1-201ENST00000392885 409 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 C2orf27AP3-201ENST00000434123 579 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 CRB3P1-201ENST00000449338 276 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 MIR4683-201ENST00000579659 81 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 AL354718.3-201ENST00000616414 581 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 CR382287.1-201ENST00000623954 586 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 AC092053.3-201ENST00000641308 4975 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SMARCE1Q969G3 AL022313.4-201ENST00000562756 2046 ntBASIC16.33■□□□□ 0.2
SMARCE1Q969G3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.32■□□□□ 0.2
SMARCE1Q969G3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCE1Q969G3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCE1Q969G3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms