Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.14■□□□□ 0.34
SNED1Q8TER0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.14■□□□□ 0.34
SNED1Q8TER0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNED1Q8TER0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNED1Q8TER0 ABCD1P4-201ENST00000399687 604 ntBASIC17.14■□□□□ 0.33
SNED1Q8TER0 CDCA4P4-201ENST00000435216 680 ntBASIC17.14■□□□□ 0.33
SNED1Q8TER0 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNED1Q8TER0 AC005777.1-201ENST00000588332 187 ntBASIC17.14■□□□□ 0.33
SNED1Q8TER0 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 AC011462.4-201ENST00000616866 449 ntBASIC17.14■□□□□ 0.33
SNED1Q8TER0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNED1Q8TER0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNED1Q8TER0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNED1Q8TER0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNED1Q8TER0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNED1Q8TER0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNED1Q8TER0 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SNED1Q8TER0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 IGHEP1-201ENST00000521393 651 ntBASIC17.13■□□□□ 0.33
SNED1Q8TER0 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 AC132825.4-202ENST00000578792 434 ntBASIC17.13■□□□□ 0.33
SNED1Q8TER0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 AC092115.1-201ENST00000566277 1402 ntBASIC17.13■□□□□ 0.33
SNED1Q8TER0 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 SIRPB3P-201ENST00000340424 1216 ntBASIC17.13■□□□□ 0.33
SNED1Q8TER0 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 SNORA57-201ENST00000383870 149 ntBASIC17.13■□□□□ 0.33
SNED1Q8TER0 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 HLA-DMA-202ENST00000395303 1007 ntBASIC17.13■□□□□ 0.33
SNED1Q8TER0 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 GOLGA2P8-201ENST00000505201 779 ntBASIC17.13■□□□□ 0.33
SNED1Q8TER0 AC092612.1-201ENST00000514501 998 ntBASIC17.13■□□□□ 0.33
SNED1Q8TER0 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.13■□□□□ 0.33
SNED1Q8TER0 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNED1Q8TER0 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 ACTBP14-201ENST00000411655 1089 ntBASIC17.12■□□□□ 0.33
SNED1Q8TER0 KRT18P15-201ENST00000458108 1291 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms