Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 AHCYP4-201ENST00000419201 1315 ntBASIC15.27■□□□□ 0.04
UBA3Q8TBC4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 KRT8P13-201ENST00000463294 1010 ntBASIC15.27■□□□□ 0.04
UBA3Q8TBC4 RCC2P8-201ENST00000502779 1035 ntBASIC15.27■□□□□ 0.04
UBA3Q8TBC4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 AC244093.1-201ENST00000610837 814 ntBASIC15.27■□□□□ 0.04
UBA3Q8TBC4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA3Q8TBC4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBA3Q8TBC4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AC020907.1-201ENST00000616460 1350 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AC091804.1-201ENST00000486888 567 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AC125604.1-201ENST00000496255 707 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AC020914.3-201ENST00000594712 304 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AC026740.1-201ENST00000607068 791 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AL157813.1-201ENST00000612996 587 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AC138649.2-201ENST00000615886 705 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AL591471.1-201ENST00000621855 229 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AP002353.1-201ENST00000528257 1599 ntBASIC15.26■□□□□ 0.03
UBA3Q8TBC4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
UBA3Q8TBC4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms