Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 AP001267.2-201ENST00000532619 2086 ntBASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 NORAD-201ENST00000565493 5339 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 AC068587.6-202ENST00000641839 5619 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 CICP20-201ENST00000443330 2801 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 AL807761.2-201ENST00000422849 729 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 DUX4L50-201ENST00000455245 715 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 AC093752.3-201ENST00000567343 901 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 MIR4522-201ENST00000584932 87 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 AC007881.3-201ENST00000608897 607 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 KRT8P31-201ENST00000504812 1408 ntBASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SHKBP1Q8TBC3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 RN7SL530P-201ENST00000485097 298 ntBASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 AC135983.4-201ENST00000564116 1262 ntBASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 AC007326.1-201ENST00000604539 458 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms