Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC131902.2-201ENST00000566892 2172 ntBASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 FP325330.2-201ENST00000624219 5630 ntBASIC12.54□□□□□ -0.4
BEST4Q8NFU0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.54□□□□□ -0.4
BEST4Q8NFU0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ZNF890P-202ENST00000530367 1156 ntBASIC12.54□□□□□ -0.4
BEST4Q8NFU0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 MIR6074-201ENST00000612054 107 ntBASIC12.54□□□□□ -0.4
BEST4Q8NFU0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BEST4Q8NFU0 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 AL022342.1-201ENST00000400363 863 ntBASIC12.53□□□□□ -0.4
BEST4Q8NFU0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 MEIS3P1-201ENST00000495167 958 ntBASIC12.53□□□□□ -0.4
BEST4Q8NFU0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 AC027369.6-201ENST00000525520 931 ntBASIC12.53□□□□□ -0.4
BEST4Q8NFU0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 AL121894.2-201ENST00000602977 491 ntBASIC12.53□□□□□ -0.4
BEST4Q8NFU0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms