Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 AC046158.3-201ENST00000624947 2558 ntBASIC19.24■□□□□ 0.67
XRN1Q8IZH2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 PSME2-217ENST00000615264 874 ntTSL 5 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 AC139100.2-201ENST00000616901 662 ntBASIC19.23■□□□□ 0.67
XRN1Q8IZH2 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 PSME2-218ENST00000630027 185 ntTSL 3 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
XRN1Q8IZH2 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 KRT8P6-201ENST00000399259 1207 ntBASIC19.22■□□□□ 0.67
XRN1Q8IZH2 RN7SKP212-201ENST00000410851 328 ntBASIC19.22■□□□□ 0.67
XRN1Q8IZH2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 HLA-W-207ENST00000439514 771 ntBASIC19.22■□□□□ 0.67
XRN1Q8IZH2 ISL1-203ENST00000511384 981 ntTSL 5 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 TPT1P9-201ENST00000413759 514 ntBASIC19.22■□□□□ 0.67
XRN1Q8IZH2 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 SNX20-205ENST00000610485 557 ntTSL 5 BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 BAP1-211ENST00000615113 489 ntBASIC19.22■□□□□ 0.67
XRN1Q8IZH2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRN1Q8IZH2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 BX322562.1-201ENST00000617004 561 ntBASIC19.21■□□□□ 0.67
XRN1Q8IZH2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
XRN1Q8IZH2 HSPA8P5-201ENST00000456928 2069 ntBASIC19.21■□□□□ 0.67
XRN1Q8IZH2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
XRN1Q8IZH2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRN1Q8IZH2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms