Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 OR7E115P-201ENST00000382617 1024 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 KRT17P4-201ENST00000429445 819 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 PRSS3P1-201ENST00000503996 742 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 GOLGA2P8-201ENST00000505201 779 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 RN7SKP155-201ENST00000516031 288 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 DNM1P51-201ENST00000558149 522 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 TRMT112P3-201ENST00000580149 358 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 RN7SL596P-201ENST00000582123 288 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 AL009176.1-201ENST00000607876 650 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 AC011498.7-201ENST00000624986 2027 ntBASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 AC126177.1-201ENST00000547829 2218 ntBASIC15.27■□□□□ 0.03
NPAS4Q8IUM7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 AC234644.1-201ENST00000406065 370 ntBASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 RN7SL582P-201ENST00000491078 279 ntBASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 AC013553.1-201ENST00000560906 267 ntBASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 AC006483.2-201ENST00000609813 515 ntBASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 AC232323.1-201ENST00000540724 2099 ntBASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 KRT8P43-201ENST00000406052 1458 ntBASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPAS4Q8IUM7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 TPT1P11-201ENST00000458482 498 ntBASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms