Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 PTP4A1P2-201ENST00000546033 454 ntBASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 RPSAP52-203ENST00000622976 1023 ntBASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 Z99916.3-201ENST00000623422 1080 ntBASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 TCAM1P-207ENST00000485295 1537 ntBASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AC134915.1-201ENST00000426461 574 ntBASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AL355864.2-201ENST00000447420 863 ntBASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AL583810.1-201ENST00000553344 1045 ntBASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AC084346.2-201ENST00000607097 949 ntBASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AGAP12P-201ENST00000585227 2359 ntBASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 AL607033.1-201ENST00000623900 1599 ntBASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXR1Q6PIV2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 AC099336.1-201ENST00000417053 1171 ntBASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 BCYRN1-201ENST00000418539 200 ntBASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 ACTG1P3-201ENST00000431775 1114 ntBASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms