Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTR9Q6PD62 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.12■□□□□ 0.33
CTR9Q6PD62 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTR9Q6PD62 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTR9Q6PD62 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTR9Q6PD62 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTR9Q6PD62 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTR9Q6PD62 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTR9Q6PD62 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CTR9Q6PD62 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTR9Q6PD62 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTR9Q6PD62 AC015656.1-201ENST00000624209 3578 ntBASIC17.12■□□□□ 0.33
CTR9Q6PD62 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 AC091046.1-201ENST00000331871 207 ntBASIC17.11■□□□□ 0.33
CTR9Q6PD62 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 BANF1P3-201ENST00000412556 261 ntBASIC17.11■□□□□ 0.33
CTR9Q6PD62 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 AC026320.2-201ENST00000434379 478 ntBASIC17.11■□□□□ 0.33
CTR9Q6PD62 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 AC093752.3-201ENST00000567343 901 ntBASIC17.11■□□□□ 0.33
CTR9Q6PD62 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 AC006453.1-201ENST00000636037 1257 ntBASIC17.11■□□□□ 0.33
CTR9Q6PD62 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.11■□□□□ 0.33
CTR9Q6PD62 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTR9Q6PD62 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 RPS9P1-201ENST00000419943 583 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 DUX4L50-201ENST00000455245 715 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 RN7SL277P-201ENST00000481521 288 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 RN7SL530P-201ENST00000485097 298 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 AC140658.4-201ENST00000561990 352 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 LINC01783-202ENST00000614408 828 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 BX284668.2-205ENST00000619677 828 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 TBC1D3J-201ENST00000620719 1426 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 AC005912.2-201ENST00000619492 2400 ntBASIC17.1■□□□□ 0.33
CTR9Q6PD62 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms