Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 AL512310.5-201ENST00000551999 515 ntBASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 AC004923.1-202ENST00000642106 209 ntBASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 AC007952.5-201ENST00000572818 1486 ntBASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CREB3L3Q68CJ9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 KRT18P15-201ENST00000458108 1291 ntBASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 SNORD3B-2-202ENST00000571722 791 ntBASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3L3Q68CJ9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms