Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC130709.1-201ENST00000484779 1212 ntBASIC17.27■□□□□ 0.35
RFX7Q2KHR2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 TMCO5B-205ENST00000530020 894 ntBASIC17.27■□□□□ 0.35
RFX7Q2KHR2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 KRT18P8-201ENST00000581937 1246 ntBASIC17.27■□□□□ 0.35
RFX7Q2KHR2 AC103810.10-201ENST00000606504 343 ntBASIC17.27■□□□□ 0.35
RFX7Q2KHR2 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 MIR7845-201ENST00000618396 99 ntBASIC17.27■□□□□ 0.35
RFX7Q2KHR2 AC009560.1-201ENST00000620208 434 ntBASIC17.27■□□□□ 0.35
RFX7Q2KHR2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 AC015656.1-201ENST00000624209 3578 ntBASIC17.26■□□□□ 0.35
RFX7Q2KHR2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 AL512430.1-201ENST00000392575 860 ntBASIC17.26■□□□□ 0.35
RFX7Q2KHR2 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 AC084781.1-201ENST00000613737 656 ntBASIC17.26■□□□□ 0.35
RFX7Q2KHR2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.26■□□□□ 0.35
RFX7Q2KHR2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX7Q2KHR2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 AC041040.2-201ENST00000622926 2899 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 TUBB4AP1-201ENST00000450755 1325 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 LINC00115-201ENST00000473798 1317 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 HMGA1P1-201ENST00000415560 1062 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 RPS9P1-201ENST00000419943 583 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 MRPL22P1-201ENST00000505398 616 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 SIGLEC18P-201ENST00000602271 909 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 AC068418.2-201ENST00000577309 3703 ntBASIC17.25■□□□□ 0.35
RFX7Q2KHR2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms