Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.16■□□□□ 0.02
IRX4P78413 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
IRX4P78413 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.16■□□□□ 0.02
IRX4P78413 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
IRX4P78413 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
IRX4P78413 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
IRX4P78413 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.15■□□□□ 0.02
IRX4P78413 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 LILRP1-201ENST00000444199 1370 ntBASIC15.15■□□□□ 0.02
IRX4P78413 AL157414.3-201ENST00000624276 1954 ntBASIC15.15■□□□□ 0.02
IRX4P78413 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IRX4P78413 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IRX4P78413 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
IRX4P78413 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IRX4P78413 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.15■□□□□ 0.02
IRX4P78413 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.15■□□□□ 0.02
IRX4P78413 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 Z97180.1-201ENST00000445173 988 ntBASIC15.15■□□□□ 0.02
IRX4P78413 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.15■□□□□ 0.02
IRX4P78413 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.15■□□□□ 0.02
IRX4P78413 FTLP10-202ENST00000505798 471 ntBASIC15.15■□□□□ 0.02
IRX4P78413 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.15■□□□□ 0.02
IRX4P78413 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
IRX4P78413 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IRX4P78413 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IRX4P78413 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
IRX4P78413 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IRX4P78413 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.15■□□□□ 0.02
IRX4P78413 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IRX4P78413 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 MAGEA5-201ENST00000446757 942 ntBASIC15.14■□□□□ 0.01
IRX4P78413 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.14■□□□□ 0.01
IRX4P78413 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.14■□□□□ 0.01
IRX4P78413 AC134698.3-201ENST00000523880 214 ntBASIC15.14■□□□□ 0.01
IRX4P78413 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.14■□□□□ 0.01
IRX4P78413 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.14■□□□□ 0.01
IRX4P78413 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.14■□□□□ 0.01
IRX4P78413 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 TUBBP5-203ENST00000508529 1334 ntBASIC15.14■□□□□ 0.01
IRX4P78413 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
IRX4P78413 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
IRX4P78413 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IRX4P78413 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms