Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RAE1P78406 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.65□□□□□ -0.23
RAE1P78406 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.64□□□□□ -0.23
RAE1P78406 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RAE1P78406 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RAE1P78406 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RAE1P78406 MIR658-201ENST00000385210 100 ntBASIC13.64□□□□□ -0.23
RAE1P78406 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RAE1P78406 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.64□□□□□ -0.23
RAE1P78406 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.64□□□□□ -0.23
RAE1P78406 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.64□□□□□ -0.23
RAE1P78406 XBP1P1-201ENST00000436573 652 ntBASIC13.64□□□□□ -0.23
RAE1P78406 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.64□□□□□ -0.23
RAE1P78406 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 BNIP3P42-201ENST00000454982 569 ntBASIC13.64□□□□□ -0.23
RAE1P78406 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 RNA5SP412-201ENST00000516234 123 ntBASIC13.64□□□□□ -0.23
RAE1P78406 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.64□□□□□ -0.23
RAE1P78406 BNIP3P29-201ENST00000598302 571 ntBASIC13.64□□□□□ -0.23
RAE1P78406 AC011447.5-201ENST00000616168 564 ntBASIC13.64□□□□□ -0.23
RAE1P78406 AC092299.1-201ENST00000632679 757 ntBASIC13.64□□□□□ -0.23
RAE1P78406 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RAE1P78406 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAE1P78406 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.64□□□□□ -0.23
RAE1P78406 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 AP002353.1-201ENST00000528257 1599 ntBASIC13.63□□□□□ -0.23
RAE1P78406 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 AC097376.2-205ENST00000610159 5334 ntBASIC13.63□□□□□ -0.23
RAE1P78406 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 MIR663B-201ENST00000408361 115 ntBASIC13.63□□□□□ -0.23
RAE1P78406 FAM21FP-201ENST00000426241 1131 ntBASIC13.63□□□□□ -0.23
RAE1P78406 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 AK2P2-201ENST00000439142 405 ntBASIC13.63□□□□□ -0.23
RAE1P78406 GOLGA2P4-201ENST00000441462 777 ntBASIC13.63□□□□□ -0.23
RAE1P78406 TUBB8P8-201ENST00000458717 1058 ntBASIC13.63□□□□□ -0.23
RAE1P78406 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 HLA-J-204ENST00000495278 958 ntBASIC13.63□□□□□ -0.23
RAE1P78406 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms