Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 XBP1P1-201ENST00000436573 652 ntBASIC13.75□□□□□ -0.21
SKP1P63208 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 AC044849.1-201ENST00000519737 1188 ntBASIC13.75□□□□□ -0.21
SKP1P63208 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.75□□□□□ -0.21
SKP1P63208 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.75□□□□□ -0.21
SKP1P63208 AC009779.1-201ENST00000551138 283 ntBASIC13.75□□□□□ -0.21
SKP1P63208 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.75□□□□□ -0.21
SKP1P63208 AC104506.1-201ENST00000609247 429 ntBASIC13.75□□□□□ -0.21
SKP1P63208 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.75□□□□□ -0.21
SKP1P63208 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.75□□□□□ -0.21
SKP1P63208 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SKP1P63208 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.75□□□□□ -0.21
SKP1P63208 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.75□□□□□ -0.21
SKP1P63208 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SKP1P63208 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.75□□□□□ -0.21
SKP1P63208 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SKP1P63208 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 LINC00552-201ENST00000625151 2579 ntBASIC13.75□□□□□ -0.21
SKP1P63208 AC018735.1-201ENST00000437208 1502 ntBASIC13.74□□□□□ -0.21
SKP1P63208 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.74□□□□□ -0.21
SKP1P63208 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.74□□□□□ -0.21
SKP1P63208 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SKP1P63208 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.74□□□□□ -0.21
SKP1P63208 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SKP1P63208 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.74□□□□□ -0.21
SKP1P63208 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
SKP1P63208 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SKP1P63208 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SKP1P63208 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 GPAA1P2-201ENST00000417923 928 ntBASIC13.74□□□□□ -0.21
SKP1P63208 AC125604.1-201ENST00000496255 707 ntBASIC13.74□□□□□ -0.21
SKP1P63208 PGAM1P5-201ENST00000548011 764 ntBASIC13.74□□□□□ -0.21
SKP1P63208 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.74□□□□□ -0.21
SKP1P63208 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.74□□□□□ -0.21
SKP1P63208 SNORD3B-2-202ENST00000571722 791 ntBASIC13.74□□□□□ -0.21
SKP1P63208 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 AC103810.3-201ENST00000583567 96 ntBASIC13.74□□□□□ -0.21
SKP1P63208 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.74□□□□□ -0.21
SKP1P63208 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SKP1P63208 AC090386.2-201ENST00000623010 1039 ntBASIC13.74□□□□□ -0.21
SKP1P63208 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.74□□□□□ -0.21
SKP1P63208 AL805961.1-203ENST00000641078 1258 ntBASIC13.74□□□□□ -0.21
SKP1P63208 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
SKP1P63208 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.74□□□□□ -0.21
SKP1P63208 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
SKP1P63208 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SKP1P63208 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SKP1P63208 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.74□□□□□ -0.21
SKP1P63208 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.73□□□□□ -0.21
SKP1P63208 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
SKP1P63208 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.73□□□□□ -0.21
SKP1P63208 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SKP1P63208 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.73□□□□□ -0.21
SKP1P63208 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.73□□□□□ -0.21
SKP1P63208 OR2I1P-208ENST00000641137 4948 ntBASIC13.73□□□□□ -0.21
SKP1P63208 AC026748.1-201ENST00000624349 3251 ntBASIC13.73□□□□□ -0.21
SKP1P63208 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.73□□□□□ -0.21
SKP1P63208 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 RN7SKP214-201ENST00000364208 315 ntBASIC13.73□□□□□ -0.21
SKP1P63208 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SKP1P63208 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SKP1P63208 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 AC104073.2-201ENST00000453737 312 ntBASIC13.73□□□□□ -0.21
SKP1P63208 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.73□□□□□ -0.21
SKP1P63208 RCC2P8-201ENST00000502779 1035 ntBASIC13.73□□□□□ -0.21
SKP1P63208 AC022217.1-201ENST00000521069 738 ntBASIC13.73□□□□□ -0.21
SKP1P63208 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms