Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 LINC00567-201ENST00000569854 3409 ntBASIC12.44□□□□□ -0.42
AP3S2P59780 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AP3S2P59780 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 AL080243.2-201ENST00000418783 582 ntBASIC12.44□□□□□ -0.42
AP3S2P59780 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.44□□□□□ -0.42
AP3S2P59780 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.44□□□□□ -0.42
AP3S2P59780 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 AC103988.2-201ENST00000561804 725 ntBASIC12.44□□□□□ -0.42
AP3S2P59780 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.44□□□□□ -0.42
AP3S2P59780 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 AC004840.1-201ENST00000636359 365 ntBASIC12.44□□□□□ -0.42
AP3S2P59780 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AP3S2P59780 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.44□□□□□ -0.42
AP3S2P59780 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.43□□□□□ -0.42
AP3S2P59780 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.43□□□□□ -0.42
AP3S2P59780 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
AP3S2P59780 KRT18P32-201ENST00000424695 1287 ntBASIC12.43□□□□□ -0.42
AP3S2P59780 AC005237.2-201ENST00000434368 219 ntBASIC12.43□□□□□ -0.42
AP3S2P59780 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
AP3S2P59780 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.43□□□□□ -0.42
AP3S2P59780 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.43□□□□□ -0.42
AP3S2P59780 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.43□□□□□ -0.42
AP3S2P59780 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.43□□□□□ -0.42
AP3S2P59780 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms