Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11AP58511 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11AP58511 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11AP58511 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.36□□□□□ -0.27
SMIM11AP58511 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11AP58511 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 OR2I1P-208ENST00000641137 4948 ntBASIC13.35□□□□□ -0.27
SMIM11AP58511 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 BAATP1-201ENST00000412284 1225 ntBASIC13.35□□□□□ -0.27
SMIM11AP58511 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.35□□□□□ -0.27
SMIM11AP58511 AC012441.1-201ENST00000446669 685 ntBASIC13.35□□□□□ -0.27
SMIM11AP58511 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 ELK1P1-201ENST00000485699 580 ntBASIC13.35□□□□□ -0.27
SMIM11AP58511 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.35□□□□□ -0.27
SMIM11AP58511 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SMIM11AP58511 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 AC134312.5-201ENST00000568031 1313 ntBASIC13.35□□□□□ -0.27
SMIM11AP58511 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SMIM11AP58511 AC107918.4-201ENST00000641966 3141 ntBASIC13.35□□□□□ -0.27
SMIM11AP58511 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM11AP58511 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
SMIM11AP58511 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SMIM11AP58511 AC020658.7-201ENST00000624274 2442 ntBASIC13.34□□□□□ -0.27
SMIM11AP58511 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM11AP58511 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SMIM11AP58511 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SMIM11AP58511 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SMIM11AP58511 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM11AP58511 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.34□□□□□ -0.27
SMIM11AP58511 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.34□□□□□ -0.27
SMIM11AP58511 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 PTP4A1P2-201ENST00000546033 454 ntBASIC13.34□□□□□ -0.27
SMIM11AP58511 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.34□□□□□ -0.27
SMIM11AP58511 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SMIM11AP58511 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.34□□□□□ -0.27
SMIM11AP58511 CHCHD2P3-201ENST00000603038 451 ntBASIC13.34□□□□□ -0.27
SMIM11AP58511 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SMIM11AP58511 AC132938.4-201ENST00000623835 848 ntBASIC13.34□□□□□ -0.27
SMIM11AP58511 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.34□□□□□ -0.27
SMIM11AP58511 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.34□□□□□ -0.27
SMIM11AP58511 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.34□□□□□ -0.27
SMIM11AP58511 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms