Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CLDN20P56880 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN20P56880 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.3□□□□□ -0.28
CLDN20P56880 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CLDN20P56880 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.3□□□□□ -0.28
CLDN20P56880 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.3□□□□□ -0.28
CLDN20P56880 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.3□□□□□ -0.28
CLDN20P56880 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.3□□□□□ -0.28
CLDN20P56880 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.3□□□□□ -0.28
CLDN20P56880 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CLDN20P56880 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.3□□□□□ -0.28
CLDN20P56880 AC009955.4-201ENST00000597192 544 ntBASIC13.3□□□□□ -0.28
CLDN20P56880 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 AL139385.1-201ENST00000611744 3272 ntBASIC13.3□□□□□ -0.28
CLDN20P56880 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CLDN20P56880 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN20P56880 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CLDN20P56880 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
CLDN20P56880 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN20P56880 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN20P56880 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms