Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RCC2P8-201ENST00000502779 1035 ntBASIC10.76□□□□□ -0.69
CMC4P56277 AC044849.1-201ENST00000519737 1188 ntBASIC10.76□□□□□ -0.69
CMC4P56277 AL512310.5-201ENST00000551999 515 ntBASIC10.76□□□□□ -0.69
CMC4P56277 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC10.76□□□□□ -0.69
CMC4P56277 PAM16-211ENST00000575848 518 ntTSL 3 BASIC10.76□□□□□ -0.69
CMC4P56277 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.76□□□□□ -0.69
CMC4P56277 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 AC018629.1-201ENST00000623381 1736 ntBASIC10.75□□□□□ -0.69
CMC4P56277 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.75□□□□□ -0.69
CMC4P56277 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CMC4P56277 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
CMC4P56277 NCR3-202ENST00000376071 541 ntTSL 5 BASIC10.75□□□□□ -0.69
CMC4P56277 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CMC4P56277 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC10.75□□□□□ -0.69
CMC4P56277 NKAIN1P1-201ENST00000435754 582 ntBASIC10.75□□□□□ -0.69
CMC4P56277 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CMC4P56277 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC10.75□□□□□ -0.69
CMC4P56277 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 AL353637.1-201ENST00000451571 732 ntBASIC10.75□□□□□ -0.69
CMC4P56277 BX284668.4-201ENST00000453917 508 ntBASIC10.75□□□□□ -0.69
CMC4P56277 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC10.75□□□□□ -0.69
CMC4P56277 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC10.75□□□□□ -0.69
CMC4P56277 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.75□□□□□ -0.69
CMC4P56277 AC026740.1-201ENST00000607068 791 ntBASIC10.75□□□□□ -0.69
CMC4P56277 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC10.75□□□□□ -0.69
CMC4P56277 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.75□□□□□ -0.69
CMC4P56277 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 TUBBP5-203ENST00000508529 1334 ntBASIC10.75□□□□□ -0.69
CMC4P56277 TUBB8P4-201ENST00000511806 1324 ntBASIC10.75□□□□□ -0.69
CMC4P56277 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 AL805961.2-201ENST00000642139 4817 ntBASIC10.75□□□□□ -0.69
CMC4P56277 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 REXO1L1P-201ENST00000379010 6598 ntBASIC10.75□□□□□ -0.69
CMC4P56277 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms