Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC011474.4-201ENST00000623523 2076 ntBASIC13.03□□□□□ -0.32
SUMO3P55854 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 AC068418.2-201ENST00000577309 3703 ntBASIC13.03□□□□□ -0.32
SUMO3P55854 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 MST1P2-201ENST00000457982 2291 ntBASIC13.03□□□□□ -0.32
SUMO3P55854 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SUMO3P55854 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
SUMO3P55854 AC007274.1-201ENST00000439805 662 ntBASIC13.03□□□□□ -0.32
SUMO3P55854 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.03□□□□□ -0.32
SUMO3P55854 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 TMEM198B-204ENST00000484016 896 ntBASIC13.03□□□□□ -0.32
SUMO3P55854 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 KRT18P8-201ENST00000581937 1246 ntBASIC13.03□□□□□ -0.32
SUMO3P55854 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.03□□□□□ -0.32
SUMO3P55854 AL645939.5-201ENST00000606834 243 ntBASIC13.03□□□□□ -0.32
SUMO3P55854 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SUMO3P55854 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SUMO3P55854 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SUMO3P55854 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SUMO3P55854 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SUMO3P55854 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.02□□□□□ -0.32
SUMO3P55854 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SUMO3P55854 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.02□□□□□ -0.32
SUMO3P55854 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
SUMO3P55854 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SUMO3P55854 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SUMO3P55854 CICP16-201ENST00000502609 2813 ntBASIC13.02□□□□□ -0.33
SUMO3P55854 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
SUMO3P55854 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.02□□□□□ -0.33
SUMO3P55854 MIR1247-201ENST00000408206 136 ntBASIC13.02□□□□□ -0.33
SUMO3P55854 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.02□□□□□ -0.33
SUMO3P55854 AC016700.1-201ENST00000429424 312 ntBASIC13.02□□□□□ -0.33
SUMO3P55854 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.02□□□□□ -0.33
SUMO3P55854 RN7SL530P-201ENST00000485097 298 ntBASIC13.02□□□□□ -0.33
SUMO3P55854 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.02□□□□□ -0.33
SUMO3P55854 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.02□□□□□ -0.33
SUMO3P55854 AC093752.3-201ENST00000567343 901 ntBASIC13.02□□□□□ -0.33
SUMO3P55854 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.02□□□□□ -0.33
SUMO3P55854 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.02□□□□□ -0.33
SUMO3P55854 MIR4538-201ENST00000581377 78 ntBASIC13.02□□□□□ -0.33
SUMO3P55854 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.02□□□□□ -0.33
SUMO3P55854 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms