Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.91■□□□□ 0.3
CACNB3P54284 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.91■□□□□ 0.3
CACNB3P54284 RN7SL788P-201ENST00000460504 316 ntBASIC16.91■□□□□ 0.3
CACNB3P54284 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 CHCHD2P2-201ENST00000503744 321 ntBASIC16.91■□□□□ 0.3
CACNB3P54284 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 AC011247.3-201ENST00000603297 438 ntBASIC16.91■□□□□ 0.3
CACNB3P54284 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 FO393412.1-201ENST00000619841 382 ntBASIC16.91■□□□□ 0.3
CACNB3P54284 AC073592.2-201ENST00000623062 780 ntBASIC16.91■□□□□ 0.3
CACNB3P54284 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
CACNB3P54284 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.91■□□□□ 0.3
CACNB3P54284 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CACNB3P54284 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNB3P54284 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNB3P54284 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 BX679664.3-201ENST00000414070 555 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 AQP7P5-201ENST00000428759 1049 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 AQP7P4-201ENST00000447083 1042 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 AQP7P2-201ENST00000453967 1041 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 AC024293.1-201ENST00000467930 498 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 AC113935.1-201ENST00000471722 555 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 IGHV1-12-201ENST00000518307 205 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.9■□□□□ 0.3
CACNB3P54284 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.9■□□□□ 0.3
CACNB3P54284 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNB3P54284 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 AQP7P3-201ENST00000624547 1041 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 AC002472.4-201ENST00000641915 272 ntBASIC16.9■□□□□ 0.3
CACNB3P54284 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CACNB3P54284 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CACNB3P54284 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNB3P54284 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNB3P54284 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNB3P54284 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CACNB3P54284 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.89■□□□□ 0.3
CACNB3P54284 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CACNB3P54284 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CACNB3P54284 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CACNB3P54284 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNB3P54284 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CACNB3P54284 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CACNB3P54284 AC019109.1-201ENST00000401725 1874 ntBASIC16.89■□□□□ 0.29
CACNB3P54284 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNB3P54284 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.89■□□□□ 0.29
CACNB3P54284 PPP1R2P4-201ENST00000424051 595 ntBASIC16.89■□□□□ 0.29
CACNB3P54284 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNB3P54284 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNB3P54284 RN7SL375P-201ENST00000492442 298 ntBASIC16.89■□□□□ 0.29
CACNB3P54284 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNB3P54284 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.89■□□□□ 0.29
CACNB3P54284 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 TREHP1-201ENST00000531328 465 ntBASIC16.89■□□□□ 0.29
CACNB3P54284 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNB3P54284 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNB3P54284 RN7SL455P-201ENST00000580629 282 ntBASIC16.89■□□□□ 0.29
CACNB3P54284 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNB3P54284 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms