Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.83□□□□□ -0.36
LHX2P50458 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.83□□□□□ -0.36
LHX2P50458 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 SIGLEC18P-201ENST00000602271 909 ntBASIC12.83□□□□□ -0.36
LHX2P50458 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 AC007952.5-201ENST00000572818 1486 ntBASIC12.83□□□□□ -0.36
LHX2P50458 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 AC007326.2-201ENST00000624224 7579 ntBASIC12.83□□□□□ -0.36
LHX2P50458 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 LINC00115-201ENST00000473798 1317 ntBASIC12.83□□□□□ -0.36
LHX2P50458 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.82□□□□□ -0.36
LHX2P50458 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LHX2P50458 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 MARK2P16-201ENST00000605714 1723 ntBASIC12.82□□□□□ -0.36
LHX2P50458 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.82□□□□□ -0.36
LHX2P50458 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.82□□□□□ -0.36
LHX2P50458 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.82□□□□□ -0.36
LHX2P50458 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.82□□□□□ -0.36
LHX2P50458 AL807761.2-201ENST00000422849 729 ntBASIC12.82□□□□□ -0.36
LHX2P50458 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.82□□□□□ -0.36
LHX2P50458 ALG1L13P-202ENST00000519320 584 ntBASIC12.82□□□□□ -0.36
LHX2P50458 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
LHX2P50458 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.82□□□□□ -0.36
LHX2P50458 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.82□□□□□ -0.36
LHX2P50458 AC007326.1-201ENST00000604539 458 ntBASIC12.82□□□□□ -0.36
LHX2P50458 AC051619.9-201ENST00000623237 597 ntBASIC12.82□□□□□ -0.36
LHX2P50458 AL353726.2-201ENST00000623259 884 ntBASIC12.82□□□□□ -0.36
LHX2P50458 AC128714.1-201ENST00000637035 887 ntBASIC12.82□□□□□ -0.36
LHX2P50458 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LHX2P50458 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LHX2P50458 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.82□□□□□ -0.36
LHX2P50458 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LHX2P50458 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LHX2P50458 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.81□□□□□ -0.36
LHX2P50458 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LHX2P50458 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LHX2P50458 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.81□□□□□ -0.36
LHX2P50458 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LHX2P50458 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
LHX2P50458 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LHX2P50458 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms