Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC008735.3-201ENST00000596646 500 ntBASIC12.91□□□□□ -0.34
SRP9P49458 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 AL445209.1-201ENST00000607269 3491 ntBASIC12.91□□□□□ -0.34
SRP9P49458 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SRP9P49458 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SRP9P49458 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SRP9P49458 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 AGAP10P-201ENST00000454844 2418 ntBASIC12.9□□□□□ -0.34
SRP9P49458 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
SRP9P49458 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.9□□□□□ -0.34
SRP9P49458 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.9□□□□□ -0.34
SRP9P49458 AC004945.1-201ENST00000416738 983 ntBASIC12.9□□□□□ -0.34
SRP9P49458 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 C2orf27AP3-201ENST00000434123 579 ntBASIC12.9□□□□□ -0.34
SRP9P49458 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SRP9P49458 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.9□□□□□ -0.34
SRP9P49458 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.9□□□□□ -0.34
SRP9P49458 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.9□□□□□ -0.34
SRP9P49458 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SRP9P49458 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.9□□□□□ -0.34
SRP9P49458 AL354718.3-201ENST00000616414 581 ntBASIC12.9□□□□□ -0.34
SRP9P49458 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SRP9P49458 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.9□□□□□ -0.34
SRP9P49458 CR382287.1-201ENST00000623954 586 ntBASIC12.9□□□□□ -0.34
SRP9P49458 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.9□□□□□ -0.34
SRP9P49458 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.9□□□□□ -0.34
SRP9P49458 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SRP9P49458 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRP9P49458 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.9□□□□□ -0.34
SRP9P49458 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SRP9P49458 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SRP9P49458 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SRP9P49458 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.9□□□□□ -0.35
SRP9P49458 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SRP9P49458 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms