Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.66□□□□□ -0.38
GDNFP39905 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.66□□□□□ -0.38
GDNFP39905 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.66□□□□□ -0.38
GDNFP39905 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.66□□□□□ -0.38
GDNFP39905 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
GDNFP39905 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.66□□□□□ -0.38
GDNFP39905 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
GDNFP39905 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.66□□□□□ -0.38
GDNFP39905 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GDNFP39905 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
GDNFP39905 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.65□□□□□ -0.38
GDNFP39905 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.65□□□□□ -0.38
GDNFP39905 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.65□□□□□ -0.38
GDNFP39905 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.65□□□□□ -0.38
GDNFP39905 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
GDNFP39905 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.65□□□□□ -0.38
GDNFP39905 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.65□□□□□ -0.38
GDNFP39905 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.65□□□□□ -0.38
GDNFP39905 FAM207CP-201ENST00000443486 507 ntBASIC12.65□□□□□ -0.38
GDNFP39905 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.65□□□□□ -0.38
GDNFP39905 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.65□□□□□ -0.38
GDNFP39905 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.65□□□□□ -0.38
GDNFP39905 AC123567.1-201ENST00000548294 1261 ntBASIC12.65□□□□□ -0.38
GDNFP39905 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.65□□□□□ -0.38
GDNFP39905 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
GDNFP39905 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.65□□□□□ -0.38
GDNFP39905 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.65□□□□□ -0.38
GDNFP39905 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GDNFP39905 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.65□□□□□ -0.38
GDNFP39905 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
GDNFP39905 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
GDNFP39905 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.65□□□□□ -0.38
GDNFP39905 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GDNFP39905 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GDNFP39905 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
GDNFP39905 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.64□□□□□ -0.39
GDNFP39905 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
GDNFP39905 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.64□□□□□ -0.39
GDNFP39905 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.64□□□□□ -0.39
GDNFP39905 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.64□□□□□ -0.39
GDNFP39905 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GDNFP39905 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GDNFP39905 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GDNFP39905 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GDNFP39905 MEP1AP4-201ENST00000423244 1087 ntBASIC12.64□□□□□ -0.39
GDNFP39905 DFFBP1-201ENST00000433250 979 ntBASIC12.64□□□□□ -0.39
GDNFP39905 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.64□□□□□ -0.39
GDNFP39905 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GDNFP39905 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.64□□□□□ -0.39
GDNFP39905 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.64□□□□□ -0.39
GDNFP39905 AC026410.3-201ENST00000514280 936 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms