Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A4P31645 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 KRT18P9-201ENST00000604826 1300 ntBASIC14.74□□□□□ -0.05
SLC6A4P31645 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC6A4P31645 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SLC6A4P31645 AL583805.1-201ENST00000391389 531 ntBASIC14.74□□□□□ -0.05
SLC6A4P31645 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC6A4P31645 ALG1L13P-202ENST00000519320 584 ntBASIC14.74□□□□□ -0.05
SLC6A4P31645 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC6A4P31645 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC6A4P31645 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC6A4P31645 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC6A4P31645 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A4P31645 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
SLC6A4P31645 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC6A4P31645 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SLC6A4P31645 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC6A4P31645 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SLC6A4P31645 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC6A4P31645 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC6A4P31645 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC6A4P31645 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC6A4P31645 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.73□□□□□ -0.05
SLC6A4P31645 MIR557-201ENST00000385239 98 ntBASIC14.73□□□□□ -0.05
SLC6A4P31645 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC6A4P31645 AP000358.1-201ENST00000456260 156 ntBASIC14.73□□□□□ -0.05
SLC6A4P31645 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 PRKXP1-201ENST00000561423 1122 ntBASIC14.73□□□□□ -0.05
SLC6A4P31645 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC6A4P31645 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
SLC6A4P31645 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SLC6A4P31645 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SLC6A4P31645 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SLC6A4P31645 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC6A4P31645 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms