Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.64□□□□□ -0.07
CCND1P24385 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCND1P24385 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCND1P24385 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCND1P24385 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.64□□□□□ -0.07
CCND1P24385 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCND1P24385 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCND1P24385 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCND1P24385 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 AC020910.6-201ENST00000623084 1459 ntBASIC14.63□□□□□ -0.07
CCND1P24385 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.63□□□□□ -0.07
CCND1P24385 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 AC005229.1-201ENST00000392885 409 ntBASIC14.63□□□□□ -0.07
CCND1P24385 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CCND1P24385 AL512384.1-201ENST00000406683 331 ntBASIC14.63□□□□□ -0.07
CCND1P24385 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.63□□□□□ -0.07
CCND1P24385 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.63□□□□□ -0.07
CCND1P24385 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 EIF3FP3-201ENST00000434851 1086 ntBASIC14.63□□□□□ -0.07
CCND1P24385 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.63□□□□□ -0.07
CCND1P24385 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.63□□□□□ -0.07
CCND1P24385 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.63□□□□□ -0.07
CCND1P24385 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.63□□□□□ -0.07
CCND1P24385 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.63□□□□□ -0.07
CCND1P24385 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.63□□□□□ -0.07
CCND1P24385 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CCND1P24385 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCND1P24385 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CCND1P24385 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.63□□□□□ -0.07
CCND1P24385 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.62□□□□□ -0.07
CCND1P24385 COX20P2-201ENST00000452636 358 ntBASIC14.62□□□□□ -0.07
CCND1P24385 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.62□□□□□ -0.07
CCND1P24385 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.62□□□□□ -0.07
CCND1P24385 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.62□□□□□ -0.07
CCND1P24385 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.62□□□□□ -0.07
CCND1P24385 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.62□□□□□ -0.07
CCND1P24385 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.62□□□□□ -0.07
CCND1P24385 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 AGGF1P1-201ENST00000509500 2073 ntBASIC14.62□□□□□ -0.07
CCND1P24385 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.62□□□□□ -0.07
CCND1P24385 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCND1P24385 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCND1P24385 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms