Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.14□□□□□ -0.63
RAB4AP20338 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.14□□□□□ -0.63
RAB4AP20338 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
RAB4AP20338 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.13□□□□□ -0.63
RAB4AP20338 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 KHSRPP1-201ENST00000427983 1768 ntBASIC11.13□□□□□ -0.63
RAB4AP20338 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.13□□□□□ -0.63
RAB4AP20338 AC024075.2-201ENST00000598112 1473 ntBASIC11.13□□□□□ -0.63
RAB4AP20338 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
RAB4AP20338 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.13□□□□□ -0.63
RAB4AP20338 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
RAB4AP20338 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB4AP20338 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.13□□□□□ -0.63
RAB4AP20338 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB4AP20338 HCG4P8-203ENST00000443049 980 ntBASIC11.13□□□□□ -0.63
RAB4AP20338 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.13□□□□□ -0.63
RAB4AP20338 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
RAB4AP20338 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB4AP20338 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
RAB4AP20338 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.13□□□□□ -0.63
RAB4AP20338 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.13□□□□□ -0.63
RAB4AP20338 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.13□□□□□ -0.63
RAB4AP20338 AC008267.7-201ENST00000624570 1194 ntBASIC11.13□□□□□ -0.63
RAB4AP20338 AL645728.2-202ENST00000641679 227 ntBASIC11.13□□□□□ -0.63
RAB4AP20338 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
RAB4AP20338 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RAB4AP20338 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
RAB4AP20338 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB4AP20338 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms