Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
FREM3P0C091 AC009093.10-201ENST00000641956 1442 ntBASIC13.09□□□□□ -0.31
FREM3P0C091 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.09□□□□□ -0.31
FREM3P0C091 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.09□□□□□ -0.31
FREM3P0C091 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 TSPY25P-201ENST00000429463 745 ntBASIC13.09□□□□□ -0.31
FREM3P0C091 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 AL133499.1-201ENST00000596207 608 ntBASIC13.09□□□□□ -0.31
FREM3P0C091 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.09□□□□□ -0.31
FREM3P0C091 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
FREM3P0C091 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
FREM3P0C091 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
FREM3P0C091 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.08□□□□□ -0.32
FREM3P0C091 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
FREM3P0C091 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 AC104581.4-201ENST00000623126 3052 ntBASIC13.08□□□□□ -0.32
FREM3P0C091 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.08□□□□□ -0.32
FREM3P0C091 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
FREM3P0C091 AC020910.6-201ENST00000623084 1459 ntBASIC13.08□□□□□ -0.32
FREM3P0C091 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.08□□□□□ -0.32
FREM3P0C091 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.08□□□□□ -0.32
FREM3P0C091 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.08□□□□□ -0.32
FREM3P0C091 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.08□□□□□ -0.32
FREM3P0C091 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
FREM3P0C091 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.08□□□□□ -0.32
FREM3P0C091 RN7SL163P-201ENST00000583100 276 ntBASIC13.08□□□□□ -0.32
FREM3P0C091 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
FREM3P0C091 AC016629.1-201ENST00000596579 586 ntBASIC13.08□□□□□ -0.32
FREM3P0C091 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
FREM3P0C091 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 AC064801.2-201ENST00000625052 1303 ntBASIC13.08□□□□□ -0.32
FREM3P0C091 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FREM3P0C091 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM3P0C091 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.07□□□□□ -0.32
FREM3P0C091 AL161932.2-201ENST00000435436 679 ntBASIC13.07□□□□□ -0.32
FREM3P0C091 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
FREM3P0C091 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM3P0C091 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM3P0C091 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.07□□□□□ -0.32
FREM3P0C091 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.07□□□□□ -0.32
FREM3P0C091 AC079336.7-201ENST00000623428 1078 ntBASIC13.07□□□□□ -0.32
FREM3P0C091 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FREM3P0C091 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
FREM3P0C091 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.07□□□□□ -0.32
FREM3P0C091 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 AC011474.4-201ENST00000623523 2076 ntBASIC13.07□□□□□ -0.32
FREM3P0C091 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms