Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC6P09630 AC106047.2-201ENST00000511723 743 ntBASIC16.1■□□□□ 0.17
HOXC6P09630 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC6P09630 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.1■□□□□ 0.17
HOXC6P09630 AC090136.2-201ENST00000517809 420 ntBASIC16.1■□□□□ 0.17
HOXC6P09630 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC6P09630 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.1■□□□□ 0.17
HOXC6P09630 TRMT112P3-201ENST00000580149 358 ntBASIC16.1■□□□□ 0.17
HOXC6P09630 MIR4265-201ENST00000582152 99 ntBASIC16.1■□□□□ 0.17
HOXC6P09630 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
HOXC6P09630 AL009176.1-201ENST00000607876 650 ntBASIC16.1■□□□□ 0.17
HOXC6P09630 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HOXC6P09630 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC6P09630 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HOXC6P09630 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC6P09630 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.09■□□□□ 0.17
HOXC6P09630 MIR1301-201ENST00000408518 82 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC6P09630 OR52M2P-201ENST00000414298 959 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 CHCHD2P2-201ENST00000503744 321 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.09■□□□□ 0.17
HOXC6P09630 TREHP1-201ENST00000531328 465 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 GOLGA2P7-209ENST00000560408 745 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 HMGB1P24-201ENST00000611897 328 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 AC215219.1-201ENST00000400706 1817 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 MTHFR-210ENST00000641407 2387 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC6P09630 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HOXC6P09630 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 RPL13AP3-202ENST00000494676 1473 ntBASIC16.09■□□□□ 0.17
HOXC6P09630 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC6P09630 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC6P09630 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC6P09630 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.08■□□□□ 0.17
HOXC6P09630 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC6P09630 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC6P09630 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
HOXC6P09630 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC6P09630 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC6P09630 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
HOXC6P09630 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
HOXC6P09630 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC6P09630 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC6P09630 OR51A9P-201ENST00000422578 911 ntBASIC16.08■□□□□ 0.16
HOXC6P09630 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.08■□□□□ 0.16
HOXC6P09630 AC092573.1-201ENST00000433054 884 ntBASIC16.08■□□□□ 0.16
HOXC6P09630 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 BPIFB5P-201ENST00000457066 1099 ntBASIC16.08■□□□□ 0.16
HOXC6P09630 AC026470.1-201ENST00000478038 846 ntBASIC16.08■□□□□ 0.16
HOXC6P09630 PRSS3P1-201ENST00000503996 742 ntBASIC16.08■□□□□ 0.16
HOXC6P09630 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.08■□□□□ 0.16
HOXC6P09630 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.08■□□□□ 0.16
HOXC6P09630 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
HOXC6P09630 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC6P09630 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.08■□□□□ 0.16
HOXC6P09630 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms