Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.72■□□□□ 0.11
VTNP04004 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.72■□□□□ 0.11
VTNP04004 MIR3180-2-201ENST00000581748 88 ntBASIC15.72■□□□□ 0.11
VTNP04004 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 AC107464.3-201ENST00000609172 737 ntBASIC15.72■□□□□ 0.11
VTNP04004 AC005618.3-201ENST00000624928 458 ntBASIC15.72■□□□□ 0.11
VTNP04004 AC009145.4-201ENST00000625119 1294 ntBASIC15.72■□□□□ 0.11
VTNP04004 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 AC090505.1-201ENST00000430515 1834 ntBASIC15.72■□□□□ 0.11
VTNP04004 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.71■□□□□ 0.11
VTNP04004 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VTNP04004 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.71■□□□□ 0.11
VTNP04004 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VTNP04004 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.71■□□□□ 0.11
VTNP04004 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.71■□□□□ 0.11
VTNP04004 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VTNP04004 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.71■□□□□ 0.11
VTNP04004 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.71■□□□□ 0.11
VTNP04004 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.71■□□□□ 0.11
VTNP04004 RPL18AP3-201ENST00000462885 528 ntBASIC15.71■□□□□ 0.11
VTNP04004 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.71■□□□□ 0.11
VTNP04004 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.71■□□□□ 0.11
VTNP04004 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.71■□□□□ 0.11
VTNP04004 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 AL021707.6-201ENST00000609212 491 ntBASIC15.71■□□□□ 0.11
VTNP04004 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VTNP04004 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VTNP04004 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VTNP04004 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VTNP04004 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VTNP04004 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.71■□□□□ 0.1
VTNP04004 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VTNP04004 PKD1P5-201ENST00000532415 10291 ntBASIC15.71■□□□□ 0.1
VTNP04004 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.71■□□□□ 0.1
VTNP04004 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
VTNP04004 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
VTNP04004 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 AL022313.4-201ENST00000562756 2046 ntBASIC15.7■□□□□ 0.1
VTNP04004 AL390755.1-201ENST00000623716 2027 ntBASIC15.7■□□□□ 0.1
VTNP04004 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VTNP04004 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.7■□□□□ 0.1
VTNP04004 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.7■□□□□ 0.1
VTNP04004 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.7■□□□□ 0.1
VTNP04004 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 HLA-DMA-203ENST00000395305 777 ntBASIC15.7■□□□□ 0.1
VTNP04004 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 AC138701.2-201ENST00000553634 226 ntBASIC15.7■□□□□ 0.1
VTNP04004 DNM1P30-201ENST00000563586 452 ntBASIC15.7■□□□□ 0.1
VTNP04004 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.7■□□□□ 0.1
VTNP04004 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.7■□□□□ 0.1
VTNP04004 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.7■□□□□ 0.1
VTNP04004 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VTNP04004 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.7■□□□□ 0.1
VTNP04004 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms