Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC079781.5-202ENST00000641784 3743 ntBASIC14.84□□□□□ -0.03
MT-CO1P00395 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.84□□□□□ -0.03
MT-CO1P00395 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 ACTG1P2-201ENST00000415776 1125 ntBASIC14.84□□□□□ -0.03
MT-CO1P00395 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 ACTG1P11-201ENST00000425411 1125 ntBASIC14.84□□□□□ -0.03
MT-CO1P00395 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-CO1P00395 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.84□□□□□ -0.03
MT-CO1P00395 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.84□□□□□ -0.03
MT-CO1P00395 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MT-CO1P00395 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.84□□□□□ -0.03
MT-CO1P00395 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 AL805961.1-203ENST00000641078 1258 ntBASIC14.84□□□□□ -0.03
MT-CO1P00395 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-CO1P00395 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-CO1P00395 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
MT-CO1P00395 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
MT-CO1P00395 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
MT-CO1P00395 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
MT-CO1P00395 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.83□□□□□ -0.03
MT-CO1P00395 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
MT-CO1P00395 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.83□□□□□ -0.03
MT-CO1P00395 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MT-CO1P00395 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MT-CO1P00395 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MT-CO1P00395 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 AL928921.2-201ENST00000641325 2442 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.83□□□□□ -0.04
MT-CO1P00395 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 RN7SKP214-201ENST00000364208 315 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.83□□□□□ -0.04
MT-CO1P00395 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-CO1P00395 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
MT-CO1P00395 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.83□□□□□ -0.04
MT-CO1P00395 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-CO1P00395 AC011742.3-201ENST00000439053 820 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 IGHJ2P-201ENST00000454480 60 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 RCC2P8-201ENST00000502779 1035 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
MT-CO1P00395 AC022447.6-201ENST00000515522 438 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-CO1P00395 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.83□□□□□ -0.04
MT-CO1P00395 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.83□□□□□ -0.04
MT-CO1P00395 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-CO1P00395 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.83□□□□□ -0.04
MT-CO1P00395 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MT-CO1P00395 AC133540.1-201ENST00000620845 1019 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.83□□□□□ -0.04
MT-CO1P00395 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-CO1P00395 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-CO1P00395 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
MT-CO1P00395 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 GRK6P1-201ENST00000400595 1711 ntBASIC14.83□□□□□ -0.04
MT-CO1P00395 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-CO1P00395 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
MT-CO1P00395 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
MT-CO1P00395 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms