Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIPK2O43353 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RIPK2O43353 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RIPK2O43353 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.68□□□□□ -0.06
RIPK2O43353 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RIPK2O43353 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RIPK2O43353 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPK2O43353 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.68□□□□□ -0.06
RIPK2O43353 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RIPK2O43353 AC098850.1-201ENST00000419919 790 ntBASIC14.68□□□□□ -0.06
RIPK2O43353 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RIPK2O43353 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.68□□□□□ -0.06
RIPK2O43353 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
RIPK2O43353 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.68□□□□□ -0.06
RIPK2O43353 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
RIPK2O43353 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.68□□□□□ -0.06
RIPK2O43353 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.68□□□□□ -0.06
RIPK2O43353 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPK2O43353 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPK2O43353 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.68□□□□□ -0.06
RIPK2O43353 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPK2O43353 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPK2O43353 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 DMBT1P1-203ENST00000636837 4628 ntBASIC14.67□□□□□ -0.06
RIPK2O43353 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RIPK2O43353 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.67□□□□□ -0.06
RIPK2O43353 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.67□□□□□ -0.06
RIPK2O43353 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.67□□□□□ -0.06
RIPK2O43353 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 AC011495.1-201ENST00000498085 584 ntBASIC14.67□□□□□ -0.06
RIPK2O43353 AC068587.3-201ENST00000526613 355 ntBASIC14.67□□□□□ -0.06
RIPK2O43353 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RIPK2O43353 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.67□□□□□ -0.06
RIPK2O43353 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.67□□□□□ -0.06
RIPK2O43353 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.67□□□□□ -0.06
RIPK2O43353 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
RIPK2O43353 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIPK2O43353 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.67□□□□□ -0.06
RIPK2O43353 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPK2O43353 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIPK2O43353 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIPK2O43353 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RIPK2O43353 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIPK2O43353 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIPK2O43353 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms