Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.41■□□□□ 0.06
O00370 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.41■□□□□ 0.06
O00370 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
O00370 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.41■□□□□ 0.06
O00370 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.41■□□□□ 0.06
O00370 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 DPM3-202ENST00000368399 517 ntBASIC15.41■□□□□ 0.06
O00370 KRT18P36-201ENST00000411618 1276 ntBASIC15.41■□□□□ 0.06
O00370 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.41■□□□□ 0.06
O00370 AC003686.1-201ENST00000550956 1034 ntBASIC15.41■□□□□ 0.06
O00370 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
O00370 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 MIR4538-201ENST00000581377 78 ntBASIC15.41■□□□□ 0.06
O00370 RN7SL219P-201ENST00000582872 296 ntBASIC15.41■□□□□ 0.06
O00370 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
O00370 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
O00370 AC068587.8-201ENST00000641239 219 ntBASIC15.41■□□□□ 0.06
O00370 AC004923.1-202ENST00000642106 209 ntBASIC15.41■□□□□ 0.06
O00370 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.41■□□□□ 0.06
O00370 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
O00370 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 AC089987.1-201ENST00000551654 2209 ntBASIC15.41■□□□□ 0.06
O00370 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.41■□□□□ 0.06
O00370 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
O00370 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.41■□□□□ 0.06
O00370 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
O00370 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.41■□□□□ 0.06
O00370 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.41■□□□□ 0.06
O00370 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
O00370 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
O00370 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
O00370 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
O00370 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.4■□□□□ 0.06
O00370 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.4■□□□□ 0.06
O00370 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
O00370 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
O00370 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.4■□□□□ 0.06
O00370 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.4■□□□□ 0.06
O00370 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.4■□□□□ 0.06
O00370 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.4■□□□□ 0.06
O00370 AC104073.2-201ENST00000453737 312 ntBASIC15.4■□□□□ 0.06
O00370 SERPINA13P-202ENST00000478994 924 ntBASIC15.4■□□□□ 0.06
O00370 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.4■□□□□ 0.06
O00370 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.4■□□□□ 0.06
O00370 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.4■□□□□ 0.06
O00370 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.4■□□□□ 0.06
O00370 AL118558.3-201ENST00000607414 1079 ntBASIC15.4■□□□□ 0.06
O00370 MIR6869-201ENST00000619434 62 ntBASIC15.4■□□□□ 0.06
O00370 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.4■□□□□ 0.06
O00370 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
O00370 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.4■□□□□ 0.06
O00370 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
O00370 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
O00370 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.4■□□□□ 0.06
O00370 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
O00370 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
O00370 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
O00370 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.39■□□□□ 0.06
O00370 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.39■□□□□ 0.05
O00370 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
O00370 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
O00370 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
O00370 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
O00370 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.39■□□□□ 0.05
O00370 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
O00370 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
O00370 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.39■□□□□ 0.05
O00370 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms