Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 KRT8P4-201ENST00000509735 1454 ntBASIC13.93□□□□□ -0.18
SLC28A1O00337 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 AC006001.1-201ENST00000325130 474 ntBASIC13.93□□□□□ -0.18
SLC28A1O00337 MIR326-201ENST00000362220 95 ntBASIC13.93□□□□□ -0.18
SLC28A1O00337 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SLC28A1O00337 TTTY23B-201ENST00000442790 549 ntBASIC13.93□□□□□ -0.18
SLC28A1O00337 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC28A1O00337 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC28A1O00337 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 KRT90P-201ENST00000549264 1064 ntBASIC13.93□□□□□ -0.18
SLC28A1O00337 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.93□□□□□ -0.18
SLC28A1O00337 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC28A1O00337 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 CICP17-201ENST00000418553 2377 ntBASIC13.93□□□□□ -0.18
SLC28A1O00337 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC28A1O00337 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC28A1O00337 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SLC28A1O00337 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC28A1O00337 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC28A1O00337 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC28A1O00337 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC28A1O00337 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC28A1O00337 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC28A1O00337 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC28A1O00337 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.92□□□□□ -0.18
SLC28A1O00337 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.92□□□□□ -0.18
SLC28A1O00337 CHMP1AP1-201ENST00000445563 662 ntBASIC13.92□□□□□ -0.18
SLC28A1O00337 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC28A1O00337 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC28A1O00337 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC28A1O00337 PPY2P-201ENST00000582808 702 ntBASIC13.92□□□□□ -0.18
SLC28A1O00337 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 AL355385.1-201ENST00000606123 409 ntBASIC13.92□□□□□ -0.18
SLC28A1O00337 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.92□□□□□ -0.18
SLC28A1O00337 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC28A1O00337 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms